From 83b806ea617aace58401bfd5b58aa9020832a65a Mon Sep 17 00:00:00 2001
From: Michael Grund <23025878+michaelgrund@users.noreply.github.com>
Date: Wed, 4 Jan 2023 13:11:58 +0100
Subject: [PATCH 01/11] Remove the deprecated load_fractures_compilation
 function (deprecated since v0.6.0)

Related to #2302
---
 doc/api/index.rst | 1 -
 1 file changed, 1 deletion(-)

diff --git a/doc/api/index.rst b/doc/api/index.rst
index 618e95b6786..7f80f471ec9 100644
--- a/doc/api/index.rst
+++ b/doc/api/index.rst
@@ -235,7 +235,6 @@ Use :func:`pygmt.datasets.load_sample_data` instead.
 .. autosummary::
     :toctree: generated
 
-    datasets.load_fractures_compilation
     datasets.load_hotspots
     datasets.load_japan_quakes
     datasets.load_mars_shape

From 719f45fe7ba987c2bf8fb8eb85b7c749688a1f5b Mon Sep 17 00:00:00 2001
From: Michael Grund <23025878+michaelgrund@users.noreply.github.com>
Date: Wed, 4 Jan 2023 13:14:02 +0100
Subject: [PATCH 02/11] Update __init__.py

---
 pygmt/datasets/__init__.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/pygmt/datasets/__init__.py b/pygmt/datasets/__init__.py
index 87595e0b6bc..aacc7ce9ba6 100644
--- a/pygmt/datasets/__init__.py
+++ b/pygmt/datasets/__init__.py
@@ -12,7 +12,6 @@
 )
 from pygmt.datasets.samples import (
     list_sample_data,
-    load_fractures_compilation,
     load_hotspots,
     load_japan_quakes,
     load_mars_shape,

From ab5c1c63065cae52599f7993689a3fb539a913ee Mon Sep 17 00:00:00 2001
From: Michael Grund <23025878+michaelgrund@users.noreply.github.com>
Date: Wed, 4 Jan 2023 13:19:08 +0100
Subject: [PATCH 03/11] Update samples.py

---
 pygmt/datasets/samples.py | 27 ++++-----------------------
 1 file changed, 4 insertions(+), 23 deletions(-)

diff --git a/pygmt/datasets/samples.py b/pygmt/datasets/samples.py
index 52cc349a1c8..415d76dd753 100644
--- a/pygmt/datasets/samples.py
+++ b/pygmt/datasets/samples.py
@@ -25,7 +25,6 @@ def list_sample_data():
     names = {
         "bathymetry": "Table of ship bathymetric observations off Baja California",
         "earth_relief_holes": "Regional 20 arc-minutes Earth relief grid with holes",
-        "fractures": "Table of hypothetical fracture lengths and azimuths",
         "hotspots": "Table of locations, names, and symbol sizes of hotpots from "
         " Mueller et al., 1993",
         "japan_quakes": "Table of earthquakes around Japan from NOAA NGDC database",
@@ -71,7 +70,6 @@ def load_sample_data(name):
     # Dictionary of public load functions for backwards compatibility
     load_func_old = {
         "bathymetry": load_sample_bathymetry,
-        "fractures": load_fractures_compilation,
         "hotspots": load_hotspots,
         "japan_quakes": load_japan_quakes,
         "mars_shape": load_mars_shape,
@@ -83,6 +81,7 @@ def load_sample_data(name):
     load_func = {
         "rock_compositions": _load_rock_sample_compositions,
         "earth_relief_holes": _load_earth_relief_holes,
+        "fractures": _load_fractures_compilation,
         "maunaloa_co2": _load_maunaloa_co2,
         "notre_dame_topography": _load_notre_dame_topography,
     }
@@ -250,20 +249,10 @@ def load_usgs_quakes(**kwargs):
     return data
 
 
-def load_fractures_compilation(**kwargs):
+def _load_fractures_compilation():
     """
-    (Deprecated) Load a table of fracture lengths and azimuths as
-    hypothetically digitized from geological maps as a pandas.DataFrame.
-
-    .. warning:: Deprecated since v0.6.0. This function has been replaced with
-       ``load_sample_data(name="fractures")`` and will be removed in
-       v0.9.0.
-
-    This is the ``@fractures_06.txt`` dataset used in the GMT tutorials.
-
-    The data are downloaded to a cache directory (usually ``~/.gmt/cache``) the
-    first time you invoke this function. Afterwards, it will load the data from
-    the cache. So you'll need an internet connection the first time around.
+    Load a table of fracture lengths and azimuths as hypothetically 
+    digitized from geological maps as a pandas.DataFrame.
 
     Returns
     -------
@@ -272,14 +261,6 @@ def load_fractures_compilation(**kwargs):
         columns.
     """
 
-    if "suppress_warning" not in kwargs:
-        warnings.warn(
-            "This function has been deprecated since v0.6.0 and will be "
-            "removed in v0.9.0. Please use "
-            "load_sample_data(name='fractures') instead.",
-            category=FutureWarning,
-            stacklevel=2,
-        )
     fname = which("@fractures_06.txt", download="c")
     data = pd.read_csv(fname, header=None, sep=r"\s+", names=["azimuth", "length"])
     return data[["length", "azimuth"]]

From cbe123776693be4b61cf02b4dbdc0e56640177cd Mon Sep 17 00:00:00 2001
From: Michael Grund <23025878+michaelgrund@users.noreply.github.com>
Date: Wed, 4 Jan 2023 13:21:44 +0100
Subject: [PATCH 04/11] Update test_datasets_samples.py

---
 pygmt/tests/test_datasets_samples.py | 5 +----
 1 file changed, 1 insertion(+), 4 deletions(-)

diff --git a/pygmt/tests/test_datasets_samples.py b/pygmt/tests/test_datasets_samples.py
index 8fa1d8153ba..f77da41b17f 100644
--- a/pygmt/tests/test_datasets_samples.py
+++ b/pygmt/tests/test_datasets_samples.py
@@ -5,7 +5,6 @@
 import pandas as pd
 import pytest
 from pygmt.datasets import (
-    load_fractures_compilation,
     load_hotspots,
     load_japan_quakes,
     load_mars_shape,
@@ -99,9 +98,7 @@ def test_fractures_compilation():
     """
     Check that the @fractures_06.txt dataset loads without errors.
     """
-    with pytest.warns(expected_warning=FutureWarning) as record:
-        data = load_fractures_compilation()
-        assert len(record) == 1
+    data = load_sample_data(name="fractures_compilation")
     assert data.shape == (361, 2)
     assert data["length"].min() == 98.6561
     assert data["length"].max() == 984.652

From ee0ac8b1499b8896e757da978f83ddfaf1a0ca4c Mon Sep 17 00:00:00 2001
From: Michael Grund <23025878+michaelgrund@users.noreply.github.com>
Date: Wed, 4 Jan 2023 13:23:06 +0100
Subject: [PATCH 05/11] Update test_datasets_samples.py

---
 pygmt/tests/test_datasets_samples.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pygmt/tests/test_datasets_samples.py b/pygmt/tests/test_datasets_samples.py
index f77da41b17f..d964dccb1f5 100644
--- a/pygmt/tests/test_datasets_samples.py
+++ b/pygmt/tests/test_datasets_samples.py
@@ -98,7 +98,7 @@ def test_fractures_compilation():
     """
     Check that the @fractures_06.txt dataset loads without errors.
     """
-    data = load_sample_data(name="fractures_compilation")
+    data = load_sample_data(name="fractures")
     assert data.shape == (361, 2)
     assert data["length"].min() == 98.6561
     assert data["length"].max() == 984.652

From 5c94813edebfb29ce984dd580574e0861563e156 Mon Sep 17 00:00:00 2001
From: Michael Grund <23025878+michaelgrund@users.noreply.github.com>
Date: Wed, 4 Jan 2023 13:36:59 +0100
Subject: [PATCH 06/11] Update samples.py

---
 pygmt/datasets/samples.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/pygmt/datasets/samples.py b/pygmt/datasets/samples.py
index 415d76dd753..d49d0be6ffa 100644
--- a/pygmt/datasets/samples.py
+++ b/pygmt/datasets/samples.py
@@ -25,6 +25,7 @@ def list_sample_data():
     names = {
         "bathymetry": "Table of ship bathymetric observations off Baja California",
         "earth_relief_holes": "Regional 20 arc-minutes Earth relief grid with holes",
+        "fractures": "Table of hypothetical fracture lengths and azimuths",
         "hotspots": "Table of locations, names, and symbol sizes of hotpots from "
         " Mueller et al., 1993",
         "japan_quakes": "Table of earthquakes around Japan from NOAA NGDC database",

From f3e47bfcdd70ddf340a21805934842968fb30838 Mon Sep 17 00:00:00 2001
From: actions-bot <58130806+actions-bot@users.noreply.github.com>
Date: Wed, 4 Jan 2023 12:39:38 +0000
Subject: [PATCH 07/11] [format-command] fixes

---
 pygmt/datasets/samples.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pygmt/datasets/samples.py b/pygmt/datasets/samples.py
index d49d0be6ffa..81cd14d8bc4 100644
--- a/pygmt/datasets/samples.py
+++ b/pygmt/datasets/samples.py
@@ -252,8 +252,8 @@ def load_usgs_quakes(**kwargs):
 
 def _load_fractures_compilation():
     """
-    Load a table of fracture lengths and azimuths as hypothetically 
-    digitized from geological maps as a pandas.DataFrame.
+    Load a table of fracture lengths and azimuths as hypothetically digitized
+    from geological maps as a pandas.DataFrame.
 
     Returns
     -------

From 1238a2688631cd8a82f6af599d02573832fe42c9 Mon Sep 17 00:00:00 2001
From: Michael Grund <23025878+michaelgrund@users.noreply.github.com>
Date: Wed, 4 Jan 2023 14:56:23 +0100
Subject: [PATCH 08/11] Apply suggestions from code review

Co-authored-by: Will Schlitzer <schlitzer90@gmail.com>
---
 pygmt/datasets/samples.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pygmt/datasets/samples.py b/pygmt/datasets/samples.py
index 81cd14d8bc4..d5983473f4f 100644
--- a/pygmt/datasets/samples.py
+++ b/pygmt/datasets/samples.py
@@ -263,7 +263,7 @@ def _load_fractures_compilation():
     """
 
     fname = which("@fractures_06.txt", download="c")
-    data = pd.read_csv(fname, header=None, sep=r"\s+", names=["azimuth", "length"])
+    data = pd.read_csv(fname, header=None, delim_whitespace=True, names=["azimuth", "length"])
     return data[["length", "azimuth"]]
 
 

From 82079f286157ca32cecc3d5d562b913850551c9d Mon Sep 17 00:00:00 2001
From: actions-bot <58130806+actions-bot@users.noreply.github.com>
Date: Fri, 6 Jan 2023 12:11:08 +0000
Subject: [PATCH 09/11] [format-command] fixes

---
 pygmt/datasets/samples.py | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/pygmt/datasets/samples.py b/pygmt/datasets/samples.py
index 498fbdc65e6..b09b69c7c9e 100644
--- a/pygmt/datasets/samples.py
+++ b/pygmt/datasets/samples.py
@@ -246,7 +246,9 @@ def _load_fractures_compilation():
     """
 
     fname = which("@fractures_06.txt", download="c")
-    data = pd.read_csv(fname, header=None, delim_whitespace=True, names=["azimuth", "length"])
+    data = pd.read_csv(
+        fname, header=None, delim_whitespace=True, names=["azimuth", "length"]
+    )
     return data[["length", "azimuth"]]
 
 

From 2163ff9050b7cc4c9fd95a289d9d7b8cfe6da7c8 Mon Sep 17 00:00:00 2001
From: Michael Grund <23025878+michaelgrund@users.noreply.github.com>
Date: Sun, 8 Jan 2023 00:00:22 +0100
Subject: [PATCH 10/11] Update samples.py

---
 pygmt/datasets/samples.py | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/pygmt/datasets/samples.py b/pygmt/datasets/samples.py
index b09b69c7c9e..b441893135e 100644
--- a/pygmt/datasets/samples.py
+++ b/pygmt/datasets/samples.py
@@ -241,8 +241,9 @@ def _load_fractures_compilation():
     Returns
     -------
     data : pandas.DataFrame
-        The data table. Use ``print(data.describe())`` to see the available
-        columns.
+        The data table. The column names are "length" and
+        "azimuth" of the fractures.
+
     """
 
     fname = which("@fractures_06.txt", download="c")

From 3661ebade39bd5cb41d606d4f712bc1dcaa97de8 Mon Sep 17 00:00:00 2001
From: actions-bot <58130806+actions-bot@users.noreply.github.com>
Date: Sat, 7 Jan 2023 23:02:38 +0000
Subject: [PATCH 11/11] [format-command] fixes

---
 pygmt/datasets/samples.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/pygmt/datasets/samples.py b/pygmt/datasets/samples.py
index b441893135e..821e8c4ade1 100644
--- a/pygmt/datasets/samples.py
+++ b/pygmt/datasets/samples.py
@@ -243,7 +243,6 @@ def _load_fractures_compilation():
     data : pandas.DataFrame
         The data table. The column names are "length" and
         "azimuth" of the fractures.
-
     """
 
     fname = which("@fractures_06.txt", download="c")