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Remove _log_and_raise_error #249

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Merged
JoshLoecker merged 6 commits into from
Mar 6, 2026
Merged

Remove _log_and_raise_error #249

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03dfc79
chore: bump zFPKM version requirement
JoshLoecker Mar 6, 2026
1e2e14f
chore: allow ruff to fix imports and `__all__` sections
JoshLoecker Mar 6, 2026
a6b25e9
chore: bump bioservices requirement
JoshLoecker Mar 6, 2026
027f97a
chore: remove the `log_and_raise_error` helper function for better vi…
JoshLoecker Mar 6, 2026
fa75fc6
chore: remove the internal `log_and_raise_error` helper function for …
JoshLoecker Mar 6, 2026
fa809c1
Merge branch 'develop' into remove-helper-func
JoshLoecker Mar 6, 2026
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2 changes: 1 addition & 1 deletion main/como/merge_xomics.py
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Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@
_SourceWeights,
)
from como.project import Config
from como.utils import get_missing_gene_data, log_and_raise_error, read_file, return_placeholder_data, set_up_logging
from como.utils import get_missing_gene_data, read_file, return_placeholder_data, set_up_logging


class _MergedHeaderNames:
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1 change: 0 additions & 1 deletion main/como/utils.py
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Expand Up @@ -18,7 +18,6 @@
T = TypeVar("T")
__all__ = [
"get_missing_gene_data",
"log_and_raise_error",
"num_columns",
"num_rows",
"read_file",
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