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@integrativebioinformatics

Integrative Bioinformatics

Laboratory of Integrative Bioinformatics

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  1. scNotebooks scNotebooks Public

    This repository contains scNotebooks, a collection of interactive Jupyter and Google Colab notebooks designed to teach and practice single‑cell and spatial transcriptomics. The notebooks guide lear…

    Jupyter Notebook 10 1

  2. UNU-BIOLAC_2025 UNU-BIOLAC_2025 Public

    CICICA and UNU-BIOLAC 2025 hands-on training on single-cell RNA sequencing data analysis.

    3

  3. EBI-lrRNAseq-2026 EBI-lrRNAseq-2026 Public

    EBML-EBI Long-read RNA-seq Course 2026

    HTML 2

  4. cernanet cernanet Public

    A comprehensive database for microRNA-mRNA and microRNA-lncRNA interactions

    1

  5. Single-Cell-Colab Single-Cell-Colab Public

    A collection of eleven Google Colaboratory notebooks designed for hands-on training in single-cell data analysis

    Jupyter Notebook 1

  6. longnoncoder longnoncoder Public

    A pipeline for isoform-level transcriptome assembly and lncRNA discovery from long-reads [AVAILABLE AND RUNNING, BUT WORK IN PROGRESS]

    Nextflow 1

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